Publication
18. Chung JJ,* Shim SH*, Everley RA, Gygi SP, Zhuang X and Clapham D, “Structurally distinct Ca2+ signaling domains of sperm flagella orchestrate tyrosine phosphorylation and motility”, Cell, 157: 808-822 (2014). *Equal authors. (Selected for PaperFlicks; Cell video abstract online)
17. Xu K,* Shim SH* and Zhuang X, “Super-resolution imaging through the localization of single molecules: an overview”, in “Far-field Optical Nanoscopy”, Edited by Tinnefeld P, Eggeling C and Hell S, Springer Series on Fluorescence (Springer, Berlin, Heidelberg, 2013). *Equal authors.
16. Shim SH,* Xia C,* Zhong G, Babcock H, Vaughan J, Huang B, Wang X, Xu C, Bi GQ and Zhuang X, “Super-resolution fluorescence imaging of organelles in live cells with photoswitchable membrane probes”, PNAS, 109: 13978-83 (2012). *Equal authors.
15. Jones SA,* Shim SH,*† He J and Zhuang X,† “Fast, three-dimensional super-resolution imaging of live cells”, Nature Methods, 8: 499-505 (2011). *Equal authors. †Corresponding authors.
14. Shim SH, Gupta R, Ling YL, Strasfeld DB, Raleigh DP and Zanni MT, “Two-dimensional IR spectroscopy and isotope labeling defines the pathway of amyloid formation with residue specific resolution”, PNAS, 106: 6614-6619 (2009).
13. Shim SH and Zanni MT, “How to turn your pump-probe experiment into a multidimensional spectrometer: 2D IR and Vis spectroscopies via pulse shaping”. Perspective article, Physical Chemistry Chemical Physics, 11: 748 (2009). **Featured on the front cover
12. Ling YL, Strasfeld DB, Shim SH, Raleigh DP and Zanni MT, “Two-dimensional IR spectroscopy provides evidence of an on-pathway intermediate in the membrane-catalyzed assembly of diabetic amyloid”, Journal of Physical Chemistry B, 113: 2498 (2009).
11. Strasfeld DB, Shim SH and Zanni MT, “New advances in mid-IR pulse shaping and its applications to 2D IR spectroscopy and ground state coherent control.” Invited article for Advances in Chemical Physics, 141: 128 (2009).
10. Xiong W, Strasfeld DB, Shim SH, and Zanni MT, “Automated 2D IR spectrometer mitigates the influence of high optical densities”, Vibrational Spectroscopy, 50: 136 (2009).
9. Strasfeld DB, Ling YL, Shim SH, and Zanni MT, “Tracking fibril formation in human Islet amyloid polypeptide with automated 2D-IR spectroscopy”, Journal of the American Chemical Society, 130: 6698 (2008).
8. Grumstrup EM,* Shim SH,* Montgomery MA,* Damrauer NH, and Zanni MT, “Facile collection of two-dimensional electronic spectra using femtosecond pulse-shaping technology,” Optics Express, 15: 16681 (2007). *Equal authors.
7. Shim SH, Strasfeld DB, Ling YL and Zanni MT, “Automated 2D IR spectroscopy using a mid-IR pulse shaper and application of this technology to the human islet amyloid polypeptide,” PNAS, 104: 14197 (2007).
6. Strasfeld DB, Shim SH and Zanni MT, “Controlling vibrational excitation with shaped mid-IR pulses,” Physical Review Letters, 99: 038102 (2007).
5. Shim SH, Strasfeld DB, Zanni MT, “Generation and characterization of phase and amplitude shaped femtosecond mid-IR pulses,” Optics Express, 14: 13120 (2006).
4. Shim SH,* Strasfeld DB,* Fulmer EC, Zanni MT, “Femtosecond pulse shaping directly in the mid-IR using acousto-optic modulation,” Optics Letters, 31: 838-840 (2006). *Equal authors.
3. Shim SH, Riaz A, Choi K and Chung DS, “Dual stacking of unbuffered saline samples, transient isotachophoresis plus induced pH junction focusing”, Electrophoresis, 24: 1603 (2003).
2. Shim SH and Chung DS, “PepAssem, a peptide assembly algorithm for a complex protein mixture”, Genome Informatics, 12: 366-367 (2001).
1. Chung H, Zhao BS, Lee SH, Cho K, Hwang SH, Shim SH, Lim SM, Kang WK and Chung DS, “Molecular lens applied to benzene and carbon disulfide molecular beams”, Journal of Chemical Physics, 114: 8293 (2001).
